Top 10 Tomato Problems and Solutions | Almanac.com

Top 10 Tomato Problems and Solutions


Why tomato plant leaves turn yellow and other problems

Do you have yellow leaves on your tomato plants? Do your tomatoes often start to crack? In this article, we list the top 10 tomato problems and the solutions to them so that you can keep your homegrown tomatoes healthy!

Blossom-End Rot

What is it? Blossom-end rot causes sunken black patches at the blossom end of tomato fruits. It is a common disease caused by dry soil conditions which results in a shortage of calcium in the plants. Plants in containers are particularly susceptible. This is caused by uneven watering (wet-dry cycles in soil) and also too much nitrogen.

Solutions: Never let your soil dry out! Tomatoes are unforgiving. Going from dry to wet and back again creates problems like blossom end rot. Keep soil consistently moist; using mulch helps. For a quick fix, treat plants with a calcium spray. Feed your tomatoes regularly with a liquid tomato fertilizer. Test soil when tomato harvest ends. Amend soil as needed.

You can eat tomatoes blossom-end rot—just cut the bottoms off.  Learn more about Blossom-End Rot.

blossom-rot_full_width.jpgImage: Blossom-end rot. See all the examples of tomato problems in the video demonstration.

Cracks in Fruit

What is it? Tomato fruits crack or split when the soil gets too dry—and then are watered heavily while the tomato is ripening. This causes the fruits to swell faster than the skins surrounding them. 

This happens when watering or a heavy downpour follows a drought, sending so much water to the plant that the fruit pops out of its skin! The way to avoid this is to keep the soil consistently moist. Don’t let it go dry and wet and dry and wet and dry and wet. It’s a spoiler.

Solutions: Keep your soil evenly moist. Prevent the condition by mulching soil and watering tomatoes deeply twice a week, instead of giving plants a little water every day. When heavy rainfall is in the forecast, pick tomatoes that are almost fully colored. Cracked fruit is edible, but the cracks are more susceptible to mold. Eat ripe, cracked tomatoes before ones with smooth skins.

Aphids and Whitefly 

What is it? Aphids and whiteflies are tiny sap-sucking insects that can appear on plants in large numbers. Some types transmit plant diseases.

Solutions: Blast off small infestations with a jet of water, or spray plants (including leaf undersides) with a soapy water solution. Plant flowers, for instance marigolds, close to your tomatoes. These will help attract aphid and whitefly predators such as ladybugs and hoverflies. If necessary you can buy these predators to introduce into enclosed environments such as a greenhouse or hoop house.

Spider Mites 

What is it?  Spider mites are tiny mites that thrive in warm, dry conditions. They can quickly weaken plants. Keep an eye out for their faint webs. Take a closer look and you might see the tiny, usually red, mites.

Solutions: To avoid problems, don’t let your tomatoes dry out. If spider mites do attack, spray the plant all over with a fine mist of water. Drape the plant with a row cover for a few days to create the shady, humid conditions that the mites dislike.

Tomato Hornworm 

What is it? The tomato hornworm is a caterpillar that chews holes in tomato fruits.

Solutions: Check your plants regularly for signs of damage, and remove and destroy any hornworms you find. You may find hornworms with little white cocoons on them. This is great news, and they belong to the larvae of braconid wasps, which feed on hornworms and help bring them under control.

See our Tomato Hornworm page for more tips.

Image: Tomato Hornworm with helpful braconid wasps.


Early blight, a fungus diseae, is very common especially in July when humidity is high. It usually begins on then lower leaves as brown spots which enlarge into concentric rings like a bull’s eye. Eventually they get bigger and run together. The lower leaves will turn yellow.

Solution: Stripping off the lower leaves as the fruits develop. Make sure the ripening tomatoes have maximum exposure to sun. Provide plenty of space for the plants. Copper and/or sulfur sprays and the biofungicide Serenade can slow or prevent further development of the fungus on remaining plants.


Late Blight 

What is it? Blight is a fatal plant disease that occurs during spells of warm, wet weather. Brown blotches show first on tomato leaves and stems, then the fruits. Eventually, the plant will wilt and collapse. Late blight also affects potatoes, which are related to tomatoes.

Solutions: This is terminal. Remove and destroy blight-infected plants as soon as you see signs of the disease. If your plants have suffered from blight in the past, try growing them under cover if possible – it’s rarely a problem with indoor tomatoes.

When watering, take care to avoid splashing the leaves. While it’s hard not to wet the leaves a little while watering, water at the soil level. Try watering in the morning so leaves have time to dry during the day, minimizing the risk of plant disease.

Magnesium Deficiency 

What is it? Magnesium deficiency is the most common mineral deficiency in tomatoes. It often occurs as a result of high potassium levels.

Solutions: Spray a solution of Epsom salts directly onto the leaves, then start using a tomato fertilizer that contains a higher proportion of magnesium.

Yellowing Leaves

The most common reason for yellow leaves is lack of nitrogen. You need to feed your tomatoes more! Tomatoes are heavy feeders requiring twice the nitrogen as cucumbers and four times as green beans.

Potassium deficiency is less common; this will show up as bright yellow leaf margins (edges) instead of yellowed leaves. Lack of iron is only an issue on younger leaves. Low magnesium shows up as interveinal yellowing on older leaves. All can be addressed with fertilizer.

Solutions: Use a nitrogen-heavy fertilizer and follow the instructions. Also, pay close attention to watering. With the use of a lot of fertilizer, the plant will also require a lot of water. To test moisture, put your finger several inches deep in the soil; if it feels dry, water thoroughly. Get a moisture meter to keep tomatoes consistently watered. 

Tomato Flowers Drop

If you see the flowers dropping, the weather may be too hot. If temperatures are consistently up to 85 F to 90 F (or above) and nights stay above 75 F, tomato flower pollen becomes unviable. Until the hot spell passes, keep plants well-watered and fertilized. Another option is to grow heat-tolerant varieties, like ‘Heatmaster,’ ‘Homestead,’ ‘Solar Fire,’ and ‘Summer Set.’

Poor Fruit Set

What is it? Poor fruit set, when flowers fail to produce fruits, has a variety of causes such as poor pollination, too much heat, poor nutrition, and very dry or very humid air.

Solutions: Open greenhouse and hoop house doors every day (weather permitting) to ventilate and to allow access for pollinating insects such as bees. Pollination can be enhanced by tapping on supports to dislodge the pollen, or gently twiddle the flowers between your fingers. If your climate’s very dry, raise the humidity around plants with regular watering. And make sure to feed your plants regularly with a store-bought tomato fertilizer or a homemade high-potassium liquid fertilizer such as comfrey tea.

Holes in Tomatoes

This is not a common issue, but we have had questions about small holes in tomatoes. This is caused by slugs because your fruit may be on the ground or handing low. They can also crawl up tomato vines and support so keep an eye on your tomatoes and use slug treatments to kill adult slugs before they lay eggs. You don’t want holes in the tomatoes because it opens up wounds and entry points for many other bugs and diseases.

Half-Eaten Tomatoes

If your tomatoes are partially eaten, you have a critter! Often, we’re talking about squirrels or chipmunks and they’re often after the water in the fruit. You could wrap your tomoatoes in plastic bird netting, clipped to tomato supports.You could also provide a water bowl or bird bath to ensure the wildlife gets its water elsewhere. 

About The Author

Catherine Boeckmann

Catherine Boeckmann loves nature, stargazing, and gardening so it’s not surprising that she and The Old Farmer’s Almanac found each other. She leads digital content for the Almanac website, and is also a certified master gardener in the state of Indiana. Read More from Catherine Boeckmann

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Debbie Taylor (not verified)

2 years 10 months ago

I prune a lot of leaves from my beefstead and celebrity tomatoes as they seem to look better is this okay. Also what fertilizer is good for tomatoes and how often 20, 20, 20, 10, 10, 10 ?

Hi, Ada. You can start your tomatoes with a balanced formula, such as 20-20-20, but once flowering begins, switch to a high potassium fertilizer. You can also find fertilizers that are specific to tomatoes. 

Kathy (not verified)

3 years 2 months ago

Having trouble with tomato anthracnose in my garden. Last year all fruit was badly spotted with these fungal spots. Online info said it's anthracnose. How do I save this year's plants from this fungus. Have never treated with anything and would like to know what to use. And how to use safely. Thank you!

Al (not verified)

3 years 9 months ago

My plants have good tomatoes just not as many as id like and my plants look like sticks not sure what im doing wrong

Rena Perozich (not verified)

3 years 11 months ago

What to do? They are in pots.

This could be Septoria leaf spot. Do not water the leaves (water the soil) and keep water from splashing on them. 

Anita (not verified)

3 years 11 months ago

I have cherry tomatoes plant growing in my greenhouse , and the leaves are turning black, the soil is always moist so why are they turning black?

Very few plants thrive in soil that is always moist, so that may be part of the problem. You may be drowning the plant. It could be bacterial spot, which is prevalent during wet seasons (you see the connection?). It could be a blight, which is a soil-based fungi, but it’s more likely water related. Water less often, e.g., when the soil is dry, and see what happens. Impossible to know if the plants will survive.

Emilie Smith (not verified)

3 years 11 months ago

Something is eating the ends off branches of my tomato plants. It may be the same "thing" that is "rooting" into some of my herbs and eating them, like my basil, and oregano. So, what ideas do you have? Is this a groundhog or rabbit making pasta? If so what do I do to stop it?